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Diversity analyses of elite maize inbred lines adapted to West and Central Africa using SSR markers.

Maydica 53: 143-149. 

• Canaran P, Buckler ES, Glaubitz JC, Stein L, Sun Q, Zhao W, Ware D. 2008.

Panzea: an update on new content and features.

Nucleic Acids Res 36: D1041-D1043. 

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Applications of linkage disequilibrium and association mapping in crop plants.

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Perspective - Selection on major components of angiosperm genomes.

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Natural genetic variation in lycopene epsilon cyclase tapped for maize biofortification.

Science 319: 330-333. 

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Molecular characterization of maize inbreds with expired US plant variety protection.

Crop Sci 48: 1673-1685. 

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Profile: Edward Buckler - Romping through maize diversity.

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PNAS 105: E105.

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BMC Bioinformatics 9: 154.

• Stich B, Mohring J, Piepho HP, Heckenberger M, Buckler ES, Melchinger AE. 2008.

Comparison of mixed-model approaches for association mapping.

Genetics 178: 1745-1754.

• Thuillet AC, Tenaillon MI, Anderson LK, Mitchell SE, Kresovich S, Stack SM, Gaut B, Doebley J. 2008.

A weak effect of background selection on trinucleotide microsatellites in maize.

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Population structure and genetic diversity of new world maize races assessed by DNA microsatellites.

Am J Bot 95: 1240-1253. 

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The genetic architecture of complex traits in teosinte (Zea mays ssp parviglumis): new evidence from association mapping.

Genetics 180: 1221-1232. 

• Yu JM, Holland JB, McMullen MD, Buckler ES. 2008.

Genetics 178: 539-551.  

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The role of regulatory genes during maize domestication: Evidence from nucleotide polymorphism and gene expression.

Genetics 178: 2133-2143. 

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Status and prospects of association mapping in plants.

Plant Genome 1: 5-20. 

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Linkage mapping of domestication loci in a large maize-teosinte backcross resource.

Genetics 177: 1915-1928. 

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Using crossover breakpoints in recombinant inbred lines to identify quantitative trait loci controlling the global recombination frequency.

Genetics 177: 1851-1858. 

• Gaut BS, Wright SI, Rizzon C, Dvorak J, Anderson LK, 2007. 

Opinion - Recombination: an underappreciated factor in the evolution of plant genomes.

Nat Rev Genet 8: 77-84. 

• Gore M, Bradbury P, Hogers R, Kirst M, Verstege E, van Oeveren J, Peleman J, Buckler E, van Eijk M, 2007.

Evaluation of target preparation methods for single-feature polymorphism detection in large complex plant genomes. 

Plant Genome 47: S135-S148. 

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Empirical comparison of simple sequence repeats and single nucleotide polymorphisms in assessment of maize diversity and relatedness. 

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Curr Opin Plant Biol 10: 156-161. 

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Patterns of selection and tissue-specific expression among maize domestication and crop improvement loci. 

Plant Physiol 144: 1642-1653. 

• Ross-Ibarra J, Morrell PL, Gaut BS, 2007. 

Plant domestication, a unique opportunity to identify the genetic basis of adaptation. 

PNAS 104: 8641-8648. 

• Stich B, Yu JM, Melchinger AE, Piepho HP, Utz HF, Maurer HP, Buckler ES, 2007.  

Power to detect higher-order epistatic interactions in a metabolic pathway using a new mapping strategy.

Genetics 176: 563-570. 

• Weber A, Clark RM, Vaughn L, Sanchez-Gonzalez JJ, Yu JM, Yandell BS, Bradbury P, Doebley J, 2007. 

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Genetics 177: 2349-2359.

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Genomic screening for artificial selection during domestication and improvement in maize.

Ann Bot 100: 967-973.

• Zhang Z, Todhunter RJ, Buckler ES, Van Vleck LD, 2007. 

Technical note: Use of marker-based relationships with multiple-trait derivative-free restricted maximal likelihood.

J Anim Sci 85: 881-885.

• Anderson LK, Lai A, Stack SM, Rizzon C, Gaut BS, 2006.

Uneven distribution of expressed sequence tag loci on maize pachytene chromosomes.

Genome Res 16: 115-122. 

• Buckler ES, Stevens NM, 2006, 

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Curr Opin Plant Biol 9: 172-176. 

• Buckler ES, Goodman MM, Holtsford TP, Doebley JF, Sanchez J, 2006. 

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Bioinformatics 22: 885-886. 

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Unfallen grains: How ancient farmers turned weeds into crops. 

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• Doebley JF, Gaut BS, Smith BD, 2006.  

The molecular genetics of crop domestication.

Cell 127: 1309-1321.

• Holland JB, 2006.

Estimating genotypic correlations and their standard errors using multivariate restricted maximum likelihood estimation with SAS Proc MIXED. 

Crop Sci 46: 642-654.

• Kirst M, Caldo R, Casati P, Tanimoto G, Walbot V, Wise RP, Buckler ES, 2006.

Genetic diversity contribution to errors in short oligonucleotide microarray analysis. 

Plant Biotechnol J 4: 489-498. 

• Morton BR, Bi IV, McMullen MD, Gaut BS, 2006.

Variation in mutation dynamics across the maize genome as a function of regional and flanking base composition. 

Genetics 172: 569-577.

• Robertson LA, Kleinschmidt CE, White DG, Payne GA, Maragos CM, Holland JB, 2006.  

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Crop Sci 46: 353-361.

• Robertson-Hoyt LA, Jines MP, Balint-Kurti PJ, Kleinschmidt CE, White DG, Payne GA, Maragos CM, Molnar TL, Holland JB, 2006. 

QTL mapping for fusarium ear rot and fumonisin contamination resistance in two maize populations. 

Crop Sci 46: 1734-1743. 

• Tracy WF, Whitt SR, Buckler ES, 2006. 

Recurrent mutation and genome evolution: Example of Sugary 1 and the origin of sweet maize. 

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Genetic association mapping and genome organization of maize.

Curr Opin Biotech 17: 155-160.

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A unified mixed-model method for association mapping that accounts for multiple levels of relatedness. 

Nature Genet 38: 203-208. 

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Estimating a nucleotide substitution rate for maize from polymorphism at a major domestication locus.

Mol Biol Evol 22: 2304-2312.

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Plant J 44: 1054-1064. 

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Genetics 169: 2241-2254. 

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PowerMarker: an integrated analysis environment for genetic marker analysis. 

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Origin matters: Lessons from the search for the wild ancestor of maize. 

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Association analysis of candidate genes for maysin and chlorogenic acid accumulation in maize silks.

Theor Appl Genet 110: 1324-1333.

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An analysis of genetic diversity across the maize genome using microsatellites.

Genetics 169: 1617-1630.

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Architecture of floral branch systems in maize and related grasses. 

Nature 436: 1119-1126. 

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Molecular population genetics and the search for adaptive evolution in plants.

Mol Biol Evol 22: 506-519.

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Developing temperate inbreds using tropical maize germplasm: Rationale, results, conclusions. 

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Crop Sci 44: 1913-1914. 

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Recovery of exotic alleles in semiexotic maize inbreds derived from crosses between Latin American accessions and a temperate line.

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Selection versus demography: A multilocus investigation of the domestication process in maize.

Mol Biol Evol 21: 1214-1225.

• Tiffin P, Hacker R, Gaut BS, 2004.

Population genetic evidence for rapid changes in intra-specific diversity and allelic cycling of defense genes in Zea. 

Genetics 168: 425-434.

• Wilson LM, Whitt SR, Ibanez-Carranza AM, Rocheford TR, Goodman MM, Buckler ES, 2004. 

Dissection of maize kernel composition and starch production by candidate gene association.

Plant Cell 16: 2719-2733.

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Annual Review of Plant Biology 54: 357-74. 

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Early allelic selection in maize as revealed by ancient DNA. 

Science 302: 1206-1208.

• Labate JA, Lamkey KR, Mitchell SE, Kresovich S, Sullivan H, Smith JSC, 2003.  

Molecular, agronomic, and historical aspects of Corn Belt Dent varietal diversity.

Crop Sci 43: 80-91.

• Liu K, Goodman MM, Muse S, Smith JSC, Buckler ES, Doebley J, 2003. 

Genetic structure and diversity among maize inbred lines as inferred from DNA microsatellites.

Genetics 165: 2117-2128.

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Directional evolution for microsatellite size in maize.

Mol Biol Evol 20: 1480-3.

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Using natural allelic diversity to evaluate gene function,

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Plant molecular diversity and applications to genomics. 

Curr Opin Plant Biol 5: 107-111. 

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Evaluation of Hbr (MITE) markers for assessment of genetic relationships among maize (Zea mays L.) inbred lines.

Theor Appl Genet 104: 104-110.

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New Phytol 154: 15-28. 

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SSR variation in important U.S. maize inbred lines.

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Microsatellites in Zea - variability, patterns of mutations, and use for evolutionary studies.

Theor Appl Genet 104: 436-450.

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PNAS 99: 6080-6084.

• Tenaillon MI, Sawkins MC, Anderson LK, Doebley JF, Stack SM, Gaut BS, 2002.

Patterns of diversity and recombination along chromosome 1 of maize (Zea mays ssp. mays L.).

Genetics 162: 1401-1413.

• Tiffin P, Gaut BS, 2002. 

Molecular evolution of the wound induced serine protease inhibitor wip1 in Zea and related genera.

Mol Biol Evol 18: 2092-2101. 

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Mol Biol Evol 19: 1251-1260.

• Vigouroux Y, McMullen M, Hittinger CT, Houchins K, Schulz L, Kresovich S, Matsuoka Y, Doebley J, 2002. 

Identifying genes of agronomic importance in maize by screening microsatellites for evidence of selection during domestication.

PNAS 99: 9650-9655.

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Population genetics of duplicated disease-defense genes, hm1 and hm2, in maize (Z. mays ssp. mays L.) and its wild ancestor (Z. mays ssp. parviglumis).

Genetics 162: 851-860.

• Buckler ES, 2001. 

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Molecular diversity, structure and domestication of grasses.

Genet Res 77: 213-218. 

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Genetics 158: 487-493.

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Patterns of chromosomal duplication in maize and their implications for comparative maps of the grasses. 

Genome Res 11: 55-66.

• Goodman MM, Carson ML, 2001. 

Reality vs. myth: Corn breeding, exotics, and genetic engineering. 

Annual Corn Sorghum Research Conference Proceedings 55: 149-172.

• Remington DL, Thornsberry JM, Matsuoka Y, Wilson LM, Whitt SR, Doebley J, Kresovich S, Goodman MM, Buckler ES, 2001. 

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PNAS 98: 11479-11484. 

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The state of the use of maize genetic diversity in the USA and sub-Saharan Africa.

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• Tenaillon M, Sawkins M, Long A, Gaut R, Doebley J, Gaut B, 2001.

Patterns of DNA sequence polymorphism along chromosome 1 of maize (Zea mays ssp. mays).

PNAS 98: 9161-9166. 

• Thornsberry J, Goodman M, Doebley J, Kresovich S, Nielsen D, Buckler E, 2001. 

Dwarf8 polymorphisms associate with variation in flowering time. 

Nature Genet 28: 286-289. 

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Sequence diversity in the tetraploid Zea perennis and the closely related diploid Z. diploperennis: Insights from four nuclear loci.

Genetics 158: 401-412.

• Gaut BS, Le Thierry d'Ennequin M, Peek AS, Sawkins MC, 2000.  

Maize as a model for the evolution of plant nuclear genomes.

PNAS 97: 7008-7015. 

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The molecular evolution of terminal ear1, a regulatory gene in the genus Zea. 

Genetics 153: 1455-1462.