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Access bam files containing HapMapV2 sequence reads aligned to B73 RefgenV2 from the iPlant Data Store
Retrieve genotypes from large-scale datasets (HapMapV1 & V2, 50K SNP chip, 1106 NAM SNPs) in a chromosomal region of interest for subsets of lines or RILs
Download complete data sets including:
Public NAM and Maize282 phenotypes
Preliminary GBS genotypes
Maize HapMapV2 genotypes
Maize HapMapV1 genotypes
NAM map and genotypes
Sequencing data in NCBI SRA
Launch TASSEL with Maize HapMap v1 genotypes
BLAST against the B73 RefGen_v1 or v2 genome
Read recent project publications
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